Cluster: HRGMv2_4571_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4571_42 | HRGMv2_4571_42_9 | 11796 | 13358 | - | 9.B.18.2.1 |
| TC | HRGMv2_4571_42 | HRGMv2_4571_42_10 | 13846 | 16374 | - | 4.C.1.1.7 |
| pfam | HRGMv2_4571_42 | HRGMv2_4571_42_11 | 16813 | 17124 | + | DUF1292 |
| CAZyme | HRGMv2_4571_42 | HRGMv2_4571_42_12 | 17167 | 18033 | - | GH18 |
Gene ID: HRGMv2_4571_42_9
Type: TC
Location: 11796 - 13358 (-)
Type: TC
Location: 11796 - 13358 (-)
Gene ID: HRGMv2_4571_42_10
Type: TC
Location: 13846 - 16374 (-)
Type: TC
Location: 13846 - 16374 (-)
Gene ID: HRGMv2_4571_42_11
Type: pfam
Location: 16813 - 17124 (+)
Type: pfam
Location: 16813 - 17124 (+)
Gene ID: HRGMv2_4571_42_12
Type: CAZyme
Location: 17167 - 18033 (-)
Type: CAZyme
Location: 17167 - 18033 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.