Cluster: HRGMv2_4571_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4571_26 | HRGMv2_4571_26_10 | 6931 | 7383 | + | 2.A.10.1.5 |
| STP | HRGMv2_4571_26 | HRGMv2_4571_26_11 | 7399 | 8670 | + | AAA |
| peptidase | HRGMv2_4571_26 | HRGMv2_4571_26_12 | 8915 | 9784 | + | S33.UNW |
| CAZyme | HRGMv2_4571_26 | HRGMv2_4571_26_13 | 9827 | 11272 | - | GH5_4 |
| TC | HRGMv2_4571_26 | HRGMv2_4571_26_14 | 11725 | 13128 | + | 2.A.25.1.4 |
| TC | HRGMv2_4571_26 | HRGMv2_4571_26_15 | 13162 | 14562 | - | 2.A.22.5.1 |
| CAZyme | HRGMv2_4571_26 | HRGMv2_4571_26_16 | 14712 | 17444 | - | CBM4 |
Gene ID: HRGMv2_4571_26_10
Type: TC
Location: 6931 - 7383 (+)
Type: TC
Location: 6931 - 7383 (+)
Gene ID: HRGMv2_4571_26_11
Type: STP
Location: 7399 - 8670 (+)
Type: STP
Location: 7399 - 8670 (+)
Gene ID: HRGMv2_4571_26_12
Type: peptidase
Location: 8915 - 9784 (+)
Type: peptidase
Location: 8915 - 9784 (+)
Gene ID: HRGMv2_4571_26_13
Type: CAZyme
Location: 9827 - 11272 (-)
Type: CAZyme
Location: 9827 - 11272 (-)
Gene ID: HRGMv2_4571_26_14
Type: TC
Location: 11725 - 13128 (+)
Type: TC
Location: 11725 - 13128 (+)
Gene ID: HRGMv2_4571_26_15
Type: TC
Location: 13162 - 14562 (-)
Type: TC
Location: 13162 - 14562 (-)
Gene ID: HRGMv2_4571_26_16
Type: CAZyme
Location: 14712 - 17444 (-)
Type: CAZyme
Location: 14712 - 17444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.