Cluster: HRGMv2_4571_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4571_22 | HRGMv2_4571_22_6 | 6348 | 6935 | + | 2.A.107.1.2 |
| CAZyme | HRGMv2_4571_22 | HRGMv2_4571_22_7 | 7013 | 9238 | - | CBM76 | GH44 |
| TF | HRGMv2_4571_22 | HRGMv2_4571_22_8 | 9495 | 11282 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4571_22 | HRGMv2_4571_22_9 | 11446 | 13704 | + | CBM75 | GH43_16 |
Gene ID: HRGMv2_4571_22_6
Type: TC
Location: 6348 - 6935 (+)
Type: TC
Location: 6348 - 6935 (+)
Gene ID: HRGMv2_4571_22_7
Type: CAZyme
Location: 7013 - 9238 (-)
Type: CAZyme
Location: 7013 - 9238 (-)
Gene ID: HRGMv2_4571_22_8
Type: TF
Location: 9495 - 11282 (+)
Type: TF
Location: 9495 - 11282 (+)
Gene ID: HRGMv2_4571_22_9
Type: CAZyme
Location: 11446 - 13704 (+)
Type: CAZyme
Location: 11446 - 13704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.