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Cluster: HRGMv2_4569_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4569_3 HRGMv2_4569_3_92 135738 137684 + GH127
TC HRGMv2_4569_3 HRGMv2_4569_3_93 138035 139825 + 3.A.1.5.25
TC HRGMv2_4569_3 HRGMv2_4569_3_94 140065 141027 + 3.A.1.5.19
TC HRGMv2_4569_3 HRGMv2_4569_3_95 141044 141976 + 3.A.1.5.2
TC HRGMv2_4569_3 HRGMv2_4569_3_96 141991 143148 + 3.A.1.5.2
TC HRGMv2_4569_3 HRGMv2_4569_3_97 143138 144139 + 3.A.1.5.20
NULL(UNKNOWN) HRGMv2_4569_3 HRGMv2_4569_3_98 144155 144553 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4569_3 HRGMv2_4569_3_99 145042 146580 + NUDIX
CAZyme HRGMv2_4569_3 HRGMv2_4569_3_100 148070 149233 - GH130_1
pfam HRGMv2_4569_3 HRGMv2_4569_3_101 149265 150437 - GlcNAc_2-epim
CAZyme HRGMv2_4569_3 HRGMv2_4569_3_102 150460 151788 - GH26
Gene ID: HRGMv2_4569_3_92
Type: CAZyme
Location: 135738 - 137684 (+)
Gene ID: HRGMv2_4569_3_93
Type: TC
Location: 138035 - 139825 (+)
Gene ID: HRGMv2_4569_3_94
Type: TC
Location: 140065 - 141027 (+)
Gene ID: HRGMv2_4569_3_95
Type: TC
Location: 141044 - 141976 (+)
Gene ID: HRGMv2_4569_3_96
Type: TC
Location: 141991 - 143148 (+)
Gene ID: HRGMv2_4569_3_97
Type: TC
Location: 143138 - 144139 (+)
Gene ID: HRGMv2_4569_3_98
Type:
Location: 144155 - 144553 (+)
Gene ID: HRGMv2_4569_3_99
Type: STP
Location: 145042 - 146580 (+)
Gene ID: HRGMv2_4569_3_100
Type: CAZyme
Location: 148070 - 149233 (-)
Gene ID: HRGMv2_4569_3_101
Type: pfam
Location: 149265 - 150437 (-)
Gene ID: HRGMv2_4569_3_102
Type: CAZyme
Location: 150460 - 151788 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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