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Cluster: HRGMv2_4569_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4569_3 HRGMv2_4569_3_39 93544 94920 + 2.A.66.1.32
TC HRGMv2_4569_3 HRGMv2_4569_3_40 94940 96319 + 2.A.66.1.33
pfam HRGMv2_4569_3 HRGMv2_4569_3_41 96474 97952 + Fucose_iso_C
NULL(UNKNOWN) HRGMv2_4569_3 HRGMv2_4569_3_42 98175 98729 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4569_3 HRGMv2_4569_3_43 98939 101194 - GH3
TF HRGMv2_4569_3 HRGMv2_4569_3_44 101367 101582 - HTH_3
NULL(UNKNOWN) HRGMv2_4569_3 HRGMv2_4569_3_45 101660 101947 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4569_3 HRGMv2_4569_3_46 102017 104332 - GH31_3
Gene ID: HRGMv2_4569_3_39
Type: TC
Location: 93544 - 94920 (+)
Gene ID: HRGMv2_4569_3_40
Type: TC
Location: 94940 - 96319 (+)
Gene ID: HRGMv2_4569_3_41
Type: pfam
Location: 96474 - 97952 (+)
Gene ID: HRGMv2_4569_3_42
Type:
Location: 98175 - 98729 (+)
Gene ID: HRGMv2_4569_3_43
Type: CAZyme
Location: 98939 - 101194 (-)
Gene ID: HRGMv2_4569_3_44
Type: TF
Location: 101367 - 101582 (-)
Gene ID: HRGMv2_4569_3_45
Type:
Location: 101660 - 101947 (+)
Gene ID: HRGMv2_4569_3_46
Type: CAZyme
Location: 102017 - 104332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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