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Cluster: HRGMv2_4569_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4569_2 HRGMv2_4569_2_46 49108 50502 + GH29
pfam HRGMv2_4569_2 HRGMv2_4569_2_47 50803 51645 + MethyltransfD12
pfam HRGMv2_4569_2 HRGMv2_4569_2_48 51758 52477 + DUF6996 | DUF6997
TC HRGMv2_4569_2 HRGMv2_4569_2_49 53247 53978 + 2.A.78.1.1
TC HRGMv2_4569_2 HRGMv2_4569_2_50 53975 54301 + 2.A.78.1.1
Gene ID: HRGMv2_4569_2_46
Type: CAZyme
Location: 49108 - 50502 (+)
Gene ID: HRGMv2_4569_2_47
Type: pfam
Location: 50803 - 51645 (+)
Gene ID: HRGMv2_4569_2_48
Type: pfam
Location: 51758 - 52477 (+)
Gene ID: HRGMv2_4569_2_49
Type: TC
Location: 53247 - 53978 (+)
Gene ID: HRGMv2_4569_2_50
Type: TC
Location: 53975 - 54301 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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