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Cluster: HRGMv2_4569_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4569_1 HRGMv2_4569_1_191 195313 196107 - 3.A.1.34.1
TC HRGMv2_4569_1 HRGMv2_4569_1_192 196100 197053 - 3.A.1.34.1
pfam HRGMv2_4569_1 HRGMv2_4569_1_193 197249 198313 - ABC_sub_bind
TC HRGMv2_4569_1 HRGMv2_4569_1_194 198624 199157 + 2.A.88.9.2
TC HRGMv2_4569_1 HRGMv2_4569_1_195 199183 200574 + 2.A.38.4.3
TF HRGMv2_4569_1 HRGMv2_4569_1_196 200645 201100 - Fe_dep_repress
pfam HRGMv2_4569_1 HRGMv2_4569_1_197 201192 201578 + DUF3783
CAZyme HRGMv2_4569_1 HRGMv2_4569_1_198 201687 202388 + GT51
Gene ID: HRGMv2_4569_1_191
Type: TC
Location: 195313 - 196107 (-)
Gene ID: HRGMv2_4569_1_192
Type: TC
Location: 196100 - 197053 (-)
Gene ID: HRGMv2_4569_1_193
Type: pfam
Location: 197249 - 198313 (-)
Gene ID: HRGMv2_4569_1_194
Type: TC
Location: 198624 - 199157 (+)
Gene ID: HRGMv2_4569_1_195
Type: TC
Location: 199183 - 200574 (+)
Gene ID: HRGMv2_4569_1_196
Type: TF
Location: 200645 - 201100 (-)
Gene ID: HRGMv2_4569_1_197
Type: pfam
Location: 201192 - 201578 (+)
Gene ID: HRGMv2_4569_1_198
Type: CAZyme
Location: 201687 - 202388 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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