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Cluster: HRGMv2_4569_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4569_6 HRGMv2_4569_6_62 65549 66604 - 3.A.1.144.3
STP HRGMv2_4569_6 HRGMv2_4569_6_63 66638 67249 - HD
TC HRGMv2_4569_6 HRGMv2_4569_6_64 67424 68314 - 2.A.115.1.1
pfam HRGMv2_4569_6 HRGMv2_4569_6_65 68487 69329 - AP_endonuc_2
CAZyme HRGMv2_4569_6 HRGMv2_4569_6_66 69348 70400 - GH179
STP HRGMv2_4569_6 HRGMv2_4569_6_67 70666 71379 + Nitroreductase
CAZyme HRGMv2_4569_6 HRGMv2_4569_6_68 71858 74179 - GH24 | SLH
pfam HRGMv2_4569_6 HRGMv2_4569_6_69 74189 75649 - NAPRTase_N | NAPRTase_C
TF HRGMv2_4569_6 HRGMv2_4569_6_70 75846 76097 + 0043707
TC HRGMv2_4569_6 HRGMv2_4569_6_71 76227 77345 + 2.A.86.1.9
Gene ID: HRGMv2_4569_6_62
Type: TC
Location: 65549 - 66604 (-)
Gene ID: HRGMv2_4569_6_63
Type: STP
Location: 66638 - 67249 (-)
Gene ID: HRGMv2_4569_6_64
Type: TC
Location: 67424 - 68314 (-)
Gene ID: HRGMv2_4569_6_65
Type: pfam
Location: 68487 - 69329 (-)
Gene ID: HRGMv2_4569_6_66
Type: CAZyme
Location: 69348 - 70400 (-)
Gene ID: HRGMv2_4569_6_67
Type: STP
Location: 70666 - 71379 (+)
Gene ID: HRGMv2_4569_6_68
Type: CAZyme
Location: 71858 - 74179 (-)
Gene ID: HRGMv2_4569_6_69
Type: pfam
Location: 74189 - 75649 (-)
Gene ID: HRGMv2_4569_6_70
Type: TF
Location: 75846 - 76097 (+)
Gene ID: HRGMv2_4569_6_71
Type: TC
Location: 76227 - 77345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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