Cluster: HRGMv2_4567_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4567
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4567_2 | HRGMv2_4567_2_140 | 161417 | 162631 | - | GT76 |
| pfam | HRGMv2_4567_2 | HRGMv2_4567_2_141 | 162771 | 165593 | + | UvrA_DNA-bind | UvrA_inter |
| pfam | HRGMv2_4567_2 | HRGMv2_4567_2_142 | 165606 | 166094 | + | Sm_multidrug_ex |
| TC | HRGMv2_4567_2 | HRGMv2_4567_2_143 | 166096 | 168303 | + | 3.A.7.16.1 |
| STP | HRGMv2_4567_2 | HRGMv2_4567_2_144 | 168300 | 168956 | + | Pribosyltran |
| TC | HRGMv2_4567_2 | HRGMv2_4567_2_145 | 168968 | 169999 | + | 1.A.33.1.5 |
Gene ID: HRGMv2_4567_2_140
Type: CAZyme
Location: 161417 - 162631 (-)
Type: CAZyme
Location: 161417 - 162631 (-)
Gene ID: HRGMv2_4567_2_141
Type: pfam
Location: 162771 - 165593 (+)
Type: pfam
Location: 162771 - 165593 (+)
Gene ID: HRGMv2_4567_2_142
Type: pfam
Location: 165606 - 166094 (+)
Type: pfam
Location: 165606 - 166094 (+)
Gene ID: HRGMv2_4567_2_143
Type: TC
Location: 166096 - 168303 (+)
Type: TC
Location: 166096 - 168303 (+)
Gene ID: HRGMv2_4567_2_144
Type: STP
Location: 168300 - 168956 (+)
Type: STP
Location: 168300 - 168956 (+)
Gene ID: HRGMv2_4567_2_145
Type: TC
Location: 168968 - 169999 (+)
Type: TC
Location: 168968 - 169999 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAJOIG01
Species
CAJOIG01 sp934597255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.