Cluster: HRGMv2_4567_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4567
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4567_37 | HRGMv2_4567_37_4 | 4931 | 7162 | + | 3.A.11.1.4 |
| pfam | HRGMv2_4567_37 | HRGMv2_4567_37_5 | 7164 | 8231 | + | DNA_pol3_delta | DNA_pol3_delta_C |
| pfam | HRGMv2_4567_37 | HRGMv2_4567_37_6 | 8224 | 8835 | + | DUF4093 |
| CAZyme | HRGMv2_4567_37 | HRGMv2_4567_37_7 | 8832 | 9944 | + | GT28 |
Gene ID: HRGMv2_4567_37_4
Type: TC
Location: 4931 - 7162 (+)
Type: TC
Location: 4931 - 7162 (+)
Gene ID: HRGMv2_4567_37_5
Type: pfam
Location: 7164 - 8231 (+)
Type: pfam
Location: 7164 - 8231 (+)
Gene ID: HRGMv2_4567_37_6
Type: pfam
Location: 8224 - 8835 (+)
Type: pfam
Location: 8224 - 8835 (+)
Gene ID: HRGMv2_4567_37_7
Type: CAZyme
Location: 8832 - 9944 (+)
Type: CAZyme
Location: 8832 - 9944 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAJOIG01
Species
CAJOIG01 sp934597255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4567_37_7 | vegetarian > omnivore | 2.13246 | 0.00106 |