Cluster: HRGMv2_4567_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4567
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4567_31 | HRGMv2_4567_31_9 | 8267 | 9376 | + | 3.A.1.1.26 |
| pfam | HRGMv2_4567_31 | HRGMv2_4567_31_10 | 9452 | 10039 | - | Hexapep | Mac | Hexapep_2 |
| pfam | HRGMv2_4567_31 | HRGMv2_4567_31_11 | 10061 | 11458 | - | FAD_binding_2 | DAO | DAO | FAD_oxidored | NAD_binding_8 |
| CAZyme | HRGMv2_4567_31 | HRGMv2_4567_31_12 | 11493 | 12977 | - | GH77 |
| TC | HRGMv2_4567_31 | HRGMv2_4567_31_13 | 13184 | 14980 | + | 2.A.58.2.2 |
| TC | HRGMv2_4567_31 | HRGMv2_4567_31_14 | 15104 | 18088 | + | 3.A.1.122.2 |
Gene ID: HRGMv2_4567_31_9
Type: TC
Location: 8267 - 9376 (+)
Type: TC
Location: 8267 - 9376 (+)
Gene ID: HRGMv2_4567_31_10
Type: pfam
Location: 9452 - 10039 (-)
Type: pfam
Location: 9452 - 10039 (-)
Gene ID: HRGMv2_4567_31_11
Type: pfam
Location: 10061 - 11458 (-)
Type: pfam
Location: 10061 - 11458 (-)
Gene ID: HRGMv2_4567_31_12
Type: CAZyme
Location: 11493 - 12977 (-)
Type: CAZyme
Location: 11493 - 12977 (-)
Gene ID: HRGMv2_4567_31_13
Type: TC
Location: 13184 - 14980 (+)
Type: TC
Location: 13184 - 14980 (+)
Gene ID: HRGMv2_4567_31_14
Type: TC
Location: 15104 - 18088 (+)
Type: TC
Location: 15104 - 18088 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAJOIG01
Species
CAJOIG01 sp934597255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.