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Cluster: HRGMv2_4567_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4567_1 HRGMv2_4567_1_85 93162 94520 + 2.A.22.5.3
TC HRGMv2_4567_1 HRGMv2_4567_1_86 94587 95231 + 9.B.124.1.3
pfam HRGMv2_4567_1 HRGMv2_4567_1_87 95284 95970 + Lyx_isomer
pfam HRGMv2_4567_1 HRGMv2_4567_1_88 95992 97029 + AlkZ-like
CAZyme HRGMv2_4567_1 HRGMv2_4567_1_89 97185 98468 + GT2
NULL(UNKNOWN) HRGMv2_4567_1 HRGMv2_4567_1_90 98588 98845 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4567_1 HRGMv2_4567_1_91 98817 99875 - 3.A.1.5.20
TC HRGMv2_4567_1 HRGMv2_4567_1_92 99877 101061 - 3.A.1.5.12
TC HRGMv2_4567_1 HRGMv2_4567_1_93 101075 103156 - 3.A.1.5.20
TC HRGMv2_4567_1 HRGMv2_4567_1_94 103173 104162 - 3.A.1.5.20
Gene ID: HRGMv2_4567_1_85
Type: TC
Location: 93162 - 94520 (+)
Gene ID: HRGMv2_4567_1_86
Type: TC
Location: 94587 - 95231 (+)
Gene ID: HRGMv2_4567_1_87
Type: pfam
Location: 95284 - 95970 (+)
Gene ID: HRGMv2_4567_1_88
Type: pfam
Location: 95992 - 97029 (+)
Gene ID: HRGMv2_4567_1_89
Type: CAZyme
Location: 97185 - 98468 (+)
Gene ID: HRGMv2_4567_1_90
Type:
Location: 98588 - 98845 (-)
Gene ID: HRGMv2_4567_1_91
Type: TC
Location: 98817 - 99875 (-)
Gene ID: HRGMv2_4567_1_92
Type: TC
Location: 99877 - 101061 (-)
Gene ID: HRGMv2_4567_1_93
Type: TC
Location: 101075 - 103156 (-)
Gene ID: HRGMv2_4567_1_94
Type: TC
Location: 103173 - 104162 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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