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Cluster: HRGMv2_4566_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4566_3 HRGMv2_4566_3_105 121822 123279 + 2.A.25.1.3
CAZyme HRGMv2_4566_3 HRGMv2_4566_3_106 123381 125336 - CBM48 | GH13_9
pfam HRGMv2_4566_3 HRGMv2_4566_3_107 125628 126065 + 4HBT | 4HBT_2
TC HRGMv2_4566_3 HRGMv2_4566_3_108 126112 128097 - 1.I.1.1.3
TC HRGMv2_4566_3 HRGMv2_4566_3_109 128669 130027 - 2.A.66.1.32
Gene ID: HRGMv2_4566_3_105
Type: TC
Location: 121822 - 123279 (+)
Gene ID: HRGMv2_4566_3_106
Type: CAZyme
Location: 123381 - 125336 (-)
Gene ID: HRGMv2_4566_3_107
Type: pfam
Location: 125628 - 126065 (+)
Gene ID: HRGMv2_4566_3_108
Type: TC
Location: 126112 - 128097 (-)
Gene ID: HRGMv2_4566_3_109
Type: TC
Location: 128669 - 130027 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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