Cluster: HRGMv2_4566_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4566
- CGC Family ID: CGCFAM_02603
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4566_28 | HRGMv2_4566_28_11 | 11447 | 12472 | + | GH177 |
| TC | HRGMv2_4566_28 | HRGMv2_4566_28_12 | 12808 | 14469 | + | 2.A.21.3.21 |
| CAZyme | HRGMv2_4566_28 | HRGMv2_4566_28_13 | 14594 | 15619 | + | GH177 |
Gene ID: HRGMv2_4566_28_11
Type: CAZyme
Location: 11447 - 12472 (+)
Type: CAZyme
Location: 11447 - 12472 (+)
Gene ID: HRGMv2_4566_28_12
Type: TC
Location: 12808 - 14469 (+)
Type: TC
Location: 12808 - 14469 (+)
Gene ID: HRGMv2_4566_28_13
Type: CAZyme
Location: 14594 - 15619 (+)
Type: CAZyme
Location: 14594 - 15619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Butyricicoccus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4566_28_11 | vegan > omnivore | 1.00895 | 0.03783 |
| HRGMv2_4566_28_12 | vegan > omnivore | 1.01498 | 0.03783 |