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Cluster: HRGMv2_4566_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4566_9 HRGMv2_4566_9_77 77279 78616 - 2.A.66.1.37
TF HRGMv2_4566_9 HRGMv2_4566_9_78 78714 79526 + MerR
NULL(UNKNOWN) HRGMv2_4566_9 HRGMv2_4566_9_79 79568 80155 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4566_9 HRGMv2_4566_9_80 80213 81052 - 8.A.5.1.4
TF HRGMv2_4566_9 HRGMv2_4566_9_81 81174 82013 + HTH_1
TC HRGMv2_4566_9 HRGMv2_4566_9_82 82083 83684 - 2.A.21.3.21
pfam HRGMv2_4566_9 HRGMv2_4566_9_83 83799 84692 - AP_endonuc_2
CAZyme HRGMv2_4566_9 HRGMv2_4566_9_84 84710 85744 - GH177
TF HRGMv2_4566_9 HRGMv2_4566_9_85 86016 86912 + HTH_AraC | HTH_AraC
TC HRGMv2_4566_9 HRGMv2_4566_9_86 86997 88592 - 2.A.21.3.21
pfam HRGMv2_4566_9 HRGMv2_4566_9_87 88834 89727 - AP_endonuc_2
CAZyme HRGMv2_4566_9 HRGMv2_4566_9_88 89804 90931 - GH109
Gene ID: HRGMv2_4566_9_77
Type: TC
Location: 77279 - 78616 (-)
Gene ID: HRGMv2_4566_9_78
Type: TF
Location: 78714 - 79526 (+)
Gene ID: HRGMv2_4566_9_79
Type:
Location: 79568 - 80155 (+)
Gene ID: HRGMv2_4566_9_80
Type: TC
Location: 80213 - 81052 (-)
Gene ID: HRGMv2_4566_9_81
Type: TF
Location: 81174 - 82013 (+)
Gene ID: HRGMv2_4566_9_82
Type: TC
Location: 82083 - 83684 (-)
Gene ID: HRGMv2_4566_9_83
Type: pfam
Location: 83799 - 84692 (-)
Gene ID: HRGMv2_4566_9_84
Type: CAZyme
Location: 84710 - 85744 (-)
Gene ID: HRGMv2_4566_9_85
Type: TF
Location: 86016 - 86912 (+)
Gene ID: HRGMv2_4566_9_86
Type: TC
Location: 86997 - 88592 (-)
Gene ID: HRGMv2_4566_9_87
Type: pfam
Location: 88834 - 89727 (-)
Gene ID: HRGMv2_4566_9_88
Type: CAZyme
Location: 89804 - 90931 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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