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Cluster: HRGMv2_4566_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4566_5 HRGMv2_4566_5_159 163172 164188 + GH177
TC HRGMv2_4566_5 HRGMv2_4566_5_160 164251 164847 + 2.A.115.2.14
TC HRGMv2_4566_5 HRGMv2_4566_5_161 164849 166225 + 2.A.2.3.3
pfam HRGMv2_4566_5 HRGMv2_4566_5_162 166243 167073 + AP_endonuc_2
TC HRGMv2_4566_5 HRGMv2_4566_5_163 167140 169320 - 9.B.74.1.1
TC HRGMv2_4566_5 HRGMv2_4566_5_164 169317 171857 - 9.B.74.1.1
TF HRGMv2_4566_5 HRGMv2_4566_5_165 172069 172974 - HTH_1
TC HRGMv2_4566_5 HRGMv2_4566_5_166 173121 173789 + 2.A.115.2.8
Gene ID: HRGMv2_4566_5_159
Type: CAZyme
Location: 163172 - 164188 (+)
Gene ID: HRGMv2_4566_5_160
Type: TC
Location: 164251 - 164847 (+)
Gene ID: HRGMv2_4566_5_161
Type: TC
Location: 164849 - 166225 (+)
Gene ID: HRGMv2_4566_5_162
Type: pfam
Location: 166243 - 167073 (+)
Gene ID: HRGMv2_4566_5_163
Type: TC
Location: 167140 - 169320 (-)
Gene ID: HRGMv2_4566_5_164
Type: TC
Location: 169317 - 171857 (-)
Gene ID: HRGMv2_4566_5_165
Type: TF
Location: 172069 - 172974 (-)
Gene ID: HRGMv2_4566_5_166
Type: TC
Location: 173121 - 173789 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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