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Cluster: HRGMv2_4566_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4566_4 HRGMv2_4566_4_130 142448 144712 + 3.A.7.16.1
STP HRGMv2_4566_4 HRGMv2_4566_4_131 144716 145342 + Pribosyltran
TC HRGMv2_4566_4 HRGMv2_4566_4_132 145444 146463 + 1.A.33.1.5
pfam HRGMv2_4566_4 HRGMv2_4566_4_133 146517 147899 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
CAZyme HRGMv2_4566_4 HRGMv2_4566_4_134 148154 149329 + GT28
STP HRGMv2_4566_4 HRGMv2_4566_4_135 149451 149969 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) HRGMv2_4566_4 HRGMv2_4566_4_136 149966 150754 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4566_4 HRGMv2_4566_4_137 151170 152807 + 4.C.1.1.4
Gene ID: HRGMv2_4566_4_130
Type: TC
Location: 142448 - 144712 (+)
Gene ID: HRGMv2_4566_4_131
Type: STP
Location: 144716 - 145342 (+)
Gene ID: HRGMv2_4566_4_132
Type: TC
Location: 145444 - 146463 (+)
Gene ID: HRGMv2_4566_4_133
Type: pfam
Location: 146517 - 147899 (-)
Gene ID: HRGMv2_4566_4_134
Type: CAZyme
Location: 148154 - 149329 (+)
Gene ID: HRGMv2_4566_4_135
Type: STP
Location: 149451 - 149969 (+)
Gene ID: HRGMv2_4566_4_136
Type:
Location: 149966 - 150754 (+)
Gene ID: HRGMv2_4566_4_137
Type: TC
Location: 151170 - 152807 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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