dbCAN Logo

Cluster: HRGMv2_4566_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4566_1 HRGMv2_4566_1_152 164118 165506 + 3.B.1.1.6
pfam HRGMv2_4566_1 HRGMv2_4566_1_153 165518 165862 + OAD_gamma
TC HRGMv2_4566_1 HRGMv2_4566_1_154 165881 166276 + 3.B.1.1.1
TC HRGMv2_4566_1 HRGMv2_4566_1_155 166292 167449 + 3.B.1.1.3
pfam HRGMv2_4566_1 HRGMv2_4566_1_156 167579 168121 + Metallophos | Metallophos_2
pfam HRGMv2_4566_1 HRGMv2_4566_1_157 168141 169475 + AcetylCoA_hydro | AcetylCoA_hyd_C
CAZyme HRGMv2_4566_1 HRGMv2_4566_1_158 169510 170676 - GH3
pfam HRGMv2_4566_1 HRGMv2_4566_1_159 170743 171978 - ABC2_membrane_2
TC HRGMv2_4566_1 HRGMv2_4566_1_160 171982 172860 - 3.A.1.148.3
Gene ID: HRGMv2_4566_1_152
Type: TC
Location: 164118 - 165506 (+)
Gene ID: HRGMv2_4566_1_153
Type: pfam
Location: 165518 - 165862 (+)
Gene ID: HRGMv2_4566_1_154
Type: TC
Location: 165881 - 166276 (+)
Gene ID: HRGMv2_4566_1_155
Type: TC
Location: 166292 - 167449 (+)
Gene ID: HRGMv2_4566_1_156
Type: pfam
Location: 167579 - 168121 (+)
Gene ID: HRGMv2_4566_1_157
Type: pfam
Location: 168141 - 169475 (+)
Gene ID: HRGMv2_4566_1_158
Type: CAZyme
Location: 169510 - 170676 (-)
Gene ID: HRGMv2_4566_1_159
Type: pfam
Location: 170743 - 171978 (-)
Gene ID: HRGMv2_4566_1_160
Type: TC
Location: 171982 - 172860 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List