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Cluster: HRGMv2_4561_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4561_4 HRGMv2_4561_4_67 68602 69597 - GT2
CAZyme HRGMv2_4561_4 HRGMv2_4561_4_68 69634 70581 - GT2
TC HRGMv2_4561_4 HRGMv2_4561_4_69 70603 71628 - 4.D.2.1.5
pfam HRGMv2_4561_4 HRGMv2_4561_4_70 71979 72728 + Exo_endo_phos
TC HRGMv2_4561_4 HRGMv2_4561_4_71 72777 73898 + 3.A.1.132.1
TC HRGMv2_4561_4 HRGMv2_4561_4_72 73898 74602 + 3.A.1.132.1
pfam HRGMv2_4561_4 HRGMv2_4561_4_73 74616 76121 + ABC_transp_aux | DUF7088
STP HRGMv2_4561_4 HRGMv2_4561_4_74 76188 77471 - Aminotran_1_2
CAZyme HRGMv2_4561_4 HRGMv2_4561_4_75 77623 79131 - GH77
Gene ID: HRGMv2_4561_4_67
Type: CAZyme
Location: 68602 - 69597 (-)
Gene ID: HRGMv2_4561_4_68
Type: CAZyme
Location: 69634 - 70581 (-)
Gene ID: HRGMv2_4561_4_69
Type: TC
Location: 70603 - 71628 (-)
Gene ID: HRGMv2_4561_4_70
Type: pfam
Location: 71979 - 72728 (+)
Gene ID: HRGMv2_4561_4_71
Type: TC
Location: 72777 - 73898 (+)
Gene ID: HRGMv2_4561_4_72
Type: TC
Location: 73898 - 74602 (+)
Gene ID: HRGMv2_4561_4_73
Type: pfam
Location: 74616 - 76121 (+)
Gene ID: HRGMv2_4561_4_74
Type: STP
Location: 76188 - 77471 (-)
Gene ID: HRGMv2_4561_4_75
Type: CAZyme
Location: 77623 - 79131 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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