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Cluster: HRGMv2_4561_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4561_3 HRGMv2_4561_3_58 72354 74714 + CBM48 | GH13_9
pfam HRGMv2_4561_3 HRGMv2_4561_3_59 74743 75957 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
pfam HRGMv2_4561_3 HRGMv2_4561_3_60 75959 77074 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4561_3 HRGMv2_4561_3_61 77120 78547 + GT5
CAZyme HRGMv2_4561_3 HRGMv2_4561_3_62 78637 80772 - GH13_11
TC HRGMv2_4561_3 HRGMv2_4561_3_63 81315 82037 + 9.B.18.1.2
Gene ID: HRGMv2_4561_3_58
Type: CAZyme
Location: 72354 - 74714 (+)
Gene ID: HRGMv2_4561_3_59
Type: pfam
Location: 74743 - 75957 (+)
Gene ID: HRGMv2_4561_3_60
Type: pfam
Location: 75959 - 77074 (+)
Gene ID: HRGMv2_4561_3_61
Type: CAZyme
Location: 77120 - 78547 (+)
Gene ID: HRGMv2_4561_3_62
Type: CAZyme
Location: 78637 - 80772 (-)
Gene ID: HRGMv2_4561_3_63
Type: TC
Location: 81315 - 82037 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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