dbCAN Logo

Cluster: HRGMv2_4561_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4561_1 HRGMv2_4561_1_242 252432 253769 + 9.A.40.2.1
TC HRGMv2_4561_1 HRGMv2_4561_1_243 253806 255560 + 3.A.1.106.2
TC HRGMv2_4561_1 HRGMv2_4561_1_244 255622 257028 + 9.A.11.1.1
pfam HRGMv2_4561_1 HRGMv2_4561_1_245 257072 258532 - Wzy_C
CAZyme HRGMv2_4561_1 HRGMv2_4561_1_246 258613 259701 - GT4
CAZyme HRGMv2_4561_1 HRGMv2_4561_1_247 259712 260728 - GT2
CAZyme HRGMv2_4561_1 HRGMv2_4561_1_248 260718 261812 - GT4
Gene ID: HRGMv2_4561_1_242
Type: TC
Location: 252432 - 253769 (+)
Gene ID: HRGMv2_4561_1_243
Type: TC
Location: 253806 - 255560 (+)
Gene ID: HRGMv2_4561_1_244
Type: TC
Location: 255622 - 257028 (+)
Gene ID: HRGMv2_4561_1_245
Type: pfam
Location: 257072 - 258532 (-)
Gene ID: HRGMv2_4561_1_246
Type: CAZyme
Location: 258613 - 259701 (-)
Gene ID: HRGMv2_4561_1_247
Type: CAZyme
Location: 259712 - 260728 (-)
Gene ID: HRGMv2_4561_1_248
Type: CAZyme
Location: 260718 - 261812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List