Cluster: HRGMv2_4561_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4561
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4561_6 | HRGMv2_4561_6_29 | 24404 | 26710 | - | GH24 |
| TC | HRGMv2_4561_6 | HRGMv2_4561_6_30 | 26889 | 29633 | + | 3.A.5.1.3 |
| pfam | HRGMv2_4561_6 | HRGMv2_4561_6_31 | 29676 | 31226 | - | MatE | Polysacc_synt |
| pfam | HRGMv2_4561_6 | HRGMv2_4561_6_32 | 31379 | 31909 | + | Acetyltransf_1 | Acetyltransf_7 |
| TC | HRGMv2_4561_6 | HRGMv2_4561_6_33 | 31951 | 32478 | - | 9.B.156.3.1 |
| TC | HRGMv2_4561_6 | HRGMv2_4561_6_34 | 32471 | 33055 | - | 9.B.156.3.1 |
Gene ID: HRGMv2_4561_6_29
Type: CAZyme
Location: 24404 - 26710 (-)
Type: CAZyme
Location: 24404 - 26710 (-)
Gene ID: HRGMv2_4561_6_30
Type: TC
Location: 26889 - 29633 (+)
Type: TC
Location: 26889 - 29633 (+)
Gene ID: HRGMv2_4561_6_31
Type: pfam
Location: 29676 - 31226 (-)
Type: pfam
Location: 29676 - 31226 (-)
Gene ID: HRGMv2_4561_6_32
Type: pfam
Location: 31379 - 31909 (+)
Type: pfam
Location: 31379 - 31909 (+)
Gene ID: HRGMv2_4561_6_33
Type: TC
Location: 31951 - 32478 (-)
Type: TC
Location: 31951 - 32478 (-)
Gene ID: HRGMv2_4561_6_34
Type: TC
Location: 32471 - 33055 (-)
Type: TC
Location: 32471 - 33055 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
HGM12814
Species
HGM12814 sp900770165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.