Cluster: HRGMv2_4555_CGC6

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_4555_14	HRGMv2_4555_14_3	4367	5605	-	2.A.23.1.5
pfam	HRGMv2_4555_14	HRGMv2_4555_14_4	5901	6608	-	Asp_Glu_race
TC	HRGMv2_4555_14	HRGMv2_4555_14_5	6643	7416	-	2.A.102.3.1
pfam	HRGMv2_4555_14	HRGMv2_4555_14_6	7418	8245	-	Hydrolase \| S6PP \| S6PP \| Hydrolase_3
TC	HRGMv2_4555_14	HRGMv2_4555_14_7	8426	11194	+	3.A.5.1.3
pfam	HRGMv2_4555_14	HRGMv2_4555_14_8	11253	12056	+	Cu-oxidase_4
TC	HRGMv2_4555_14	HRGMv2_4555_14_9	12053	13693	+	3.A.1.5.20
STP	HRGMv2_4555_14	HRGMv2_4555_14_10	13707	14198	+	HD
CAZyme	HRGMv2_4555_14	HRGMv2_4555_14_11	14768	15568	-	CE4
pfam	HRGMv2_4555_14	HRGMv2_4555_14_12	15625	15753	-	FeoB_associated
TC	HRGMv2_4555_14	HRGMv2_4555_14_13	15763	17745	-	9.A.8.1.6

Gene ID: HRGMv2_4555_14_3
Type: TC
Location: 4367 - 5605 (-)

Gene ID: HRGMv2_4555_14_4
Type: pfam
Location: 5901 - 6608 (-)

Gene ID: HRGMv2_4555_14_5
Type: TC
Location: 6643 - 7416 (-)

Gene ID: HRGMv2_4555_14_6
Type: pfam
Location: 7418 - 8245 (-)

Gene ID: HRGMv2_4555_14_7
Type: TC
Location: 8426 - 11194 (+)

Gene ID: HRGMv2_4555_14_8
Type: pfam
Location: 11253 - 12056 (+)

Gene ID: HRGMv2_4555_14_9
Type: TC
Location: 12053 - 13693 (+)

Gene ID: HRGMv2_4555_14_10
Type: STP
Location: 13707 - 14198 (+)

Gene ID: HRGMv2_4555_14_11
Type: CAZyme
Location: 14768 - 15568 (-)

Gene ID: HRGMv2_4555_14_12
Type: pfam
Location: 15625 - 15753 (-)

Gene ID: HRGMv2_4555_14_13
Type: TC
Location: 15763 - 17745 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_4555_14_4	vegetarian > vegan	1.33677	0.00022
HRGMv2_4555_14_6	vegetarian > vegan	1.69499	0.00022
HRGMv2_4555_14_8	vegetarian > vegan	1.24915	0.00022
HRGMv2_4555_14_9	vegetarian > vegan	1.19610	0.00022
HRGMv2_4555_14_10	vegetarian > vegan	2.83804	0.00022