Cluster: HRGMv2_4555_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4555
- CGC Family ID: CGCFAM_01982
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4555_11 | HRGMv2_4555_11_32 | 34040 | 35596 | + | 3.A.1.31.1 |
| pfam | HRGMv2_4555_11 | HRGMv2_4555_11_33 | 35618 | 36094 | + | CrtO |
| CAZyme | HRGMv2_4555_11 | HRGMv2_4555_11_34 | 36096 | 37214 | + | GT28 |
Gene ID: HRGMv2_4555_11_32
Type: TC
Location: 34040 - 35596 (+)
Type: TC
Location: 34040 - 35596 (+)
Gene ID: HRGMv2_4555_11_33
Type: pfam
Location: 35618 - 36094 (+)
Type: pfam
Location: 35618 - 36094 (+)
Gene ID: HRGMv2_4555_11_34
Type: CAZyme
Location: 36096 - 37214 (+)
Type: CAZyme
Location: 36096 - 37214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp934661715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4555_11_34 | vegetarian > vegan | 1.41766 | 0.00022 |