Cluster: HRGMv2_4555_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4555
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4555_1 | HRGMv2_4555_1_67 | 72394 | 73284 | - | 3.A.5.1.1 |
| pfam | HRGMv2_4555_1 | HRGMv2_4555_1_68 | 73409 | 77089 | - | SMC_N | SMC_hinge | AAA_15 | AAA_23 |
| CAZyme | HRGMv2_4555_1 | HRGMv2_4555_1_69 | 77592 | 78884 | - | GT4 |
Gene ID: HRGMv2_4555_1_67
Type: TC
Location: 72394 - 73284 (-)
Type: TC
Location: 72394 - 73284 (-)
Gene ID: HRGMv2_4555_1_68
Type: pfam
Location: 73409 - 77089 (-)
Type: pfam
Location: 73409 - 77089 (-)
Gene ID: HRGMv2_4555_1_69
Type: CAZyme
Location: 77592 - 78884 (-)
Type: CAZyme
Location: 77592 - 78884 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp934661715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.