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Cluster: HRGMv2_4551_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4551_11 HRGMv2_4551_11_19 14283 15128 - 3.A.1.15.13
TC HRGMv2_4551_11 HRGMv2_4551_11_20 15125 15910 - 3.A.1.15.5
pfam HRGMv2_4551_11 HRGMv2_4551_11_21 15907 16860 - ZnuA
NULL(UNKNOWN) HRGMv2_4551_11 HRGMv2_4551_11_22 17061 17786 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4551_11 HRGMv2_4551_11_23 17847 19970 - 3.A.10.1.13
TC HRGMv2_4551_11 HRGMv2_4551_11_24 20171 21607 - 2.A.38.1.1
TC HRGMv2_4551_11 HRGMv2_4551_11_25 21650 23086 - 2.A.38.1.3
TC HRGMv2_4551_11 HRGMv2_4551_11_26 23107 24471 - 2.A.38.1.1
pfam HRGMv2_4551_11 HRGMv2_4551_11_27 24684 26018 + MatE | MatE
CAZyme HRGMv2_4551_11 HRGMv2_4551_11_28 26075 27145 - CE4
TC HRGMv2_4551_11 HRGMv2_4551_11_29 27386 28546 - 2.A.86.1.8
TC HRGMv2_4551_11 HRGMv2_4551_11_30 28792 29376 - 2.A.115.2.14
TC HRGMv2_4551_11 HRGMv2_4551_11_31 29381 30796 - 2.A.66.1.32
Gene ID: HRGMv2_4551_11_19
Type: TC
Location: 14283 - 15128 (-)
Gene ID: HRGMv2_4551_11_20
Type: TC
Location: 15125 - 15910 (-)
Gene ID: HRGMv2_4551_11_21
Type: pfam
Location: 15907 - 16860 (-)
Gene ID: HRGMv2_4551_11_22
Type:
Location: 17061 - 17786 (+)
Gene ID: HRGMv2_4551_11_23
Type: TC
Location: 17847 - 19970 (-)
Gene ID: HRGMv2_4551_11_24
Type: TC
Location: 20171 - 21607 (-)
Gene ID: HRGMv2_4551_11_25
Type: TC
Location: 21650 - 23086 (-)
Gene ID: HRGMv2_4551_11_26
Type: TC
Location: 23107 - 24471 (-)
Gene ID: HRGMv2_4551_11_27
Type: pfam
Location: 24684 - 26018 (+)
Gene ID: HRGMv2_4551_11_28
Type: CAZyme
Location: 26075 - 27145 (-)
Gene ID: HRGMv2_4551_11_29
Type: TC
Location: 27386 - 28546 (-)
Gene ID: HRGMv2_4551_11_30
Type: TC
Location: 28792 - 29376 (-)
Gene ID: HRGMv2_4551_11_31
Type: TC
Location: 29381 - 30796 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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