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Cluster: HRGMv2_4549_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4549_35 HRGMv2_4549_35_38 40411 41340 + 9.B.146.1.4
TC HRGMv2_4549_35 HRGMv2_4549_35_39 41418 42731 - 2.A.79.1.4
CAZyme HRGMv2_4549_35 HRGMv2_4549_35_40 42892 44691 - PL33_2
NULL(UNKNOWN) HRGMv2_4549_35 HRGMv2_4549_35_41 44849 45082 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4549_35 HRGMv2_4549_35_42 45494 47020 - 9.A.11.1.1
pfam HRGMv2_4549_35 HRGMv2_4549_35_43 47241 48350 - UPF0020 | THUMP | RlmL_1st
pfam HRGMv2_4549_35 HRGMv2_4549_35_44 48356 49261 - GDPD
TC HRGMv2_4549_35 HRGMv2_4549_35_45 49270 50556 - 2.A.1.2.88
Gene ID: HRGMv2_4549_35_38
Type: TC
Location: 40411 - 41340 (+)
Gene ID: HRGMv2_4549_35_39
Type: TC
Location: 41418 - 42731 (-)
Gene ID: HRGMv2_4549_35_40
Type: CAZyme
Location: 42892 - 44691 (-)
Gene ID: HRGMv2_4549_35_41
Type:
Location: 44849 - 45082 (-)
Gene ID: HRGMv2_4549_35_42
Type: TC
Location: 45494 - 47020 (-)
Gene ID: HRGMv2_4549_35_43
Type: pfam
Location: 47241 - 48350 (-)
Gene ID: HRGMv2_4549_35_44
Type: pfam
Location: 48356 - 49261 (-)
Gene ID: HRGMv2_4549_35_45
Type: TC
Location: 49270 - 50556 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA1740
→
Species
UBA1740 sp944384525

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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