Cluster: HRGMv2_4549_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4549
- CGC Family ID: CGCFAM_01614
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4549_24 | HRGMv2_4549_24_75 | 85720 | 86589 | + | 3.A.1.26.7 |
| TC | HRGMv2_4549_24 | HRGMv2_4549_24_76 | 86576 | 86935 | + | 3.A.1.25.6 |
| TC | HRGMv2_4549_24 | HRGMv2_4549_24_77 | 86965 | 87432 | + | 3.A.1.26.9 |
| TC | HRGMv2_4549_24 | HRGMv2_4549_24_78 | 87512 | 88342 | + | 3.A.1.25.4 |
| pfam | HRGMv2_4549_24 | HRGMv2_4549_24_79 | 88344 | 89102 | + | PseudoU_synth_1 | PseudoU_synth_1 |
| CAZyme | HRGMv2_4549_24 | HRGMv2_4549_24_80 | 89196 | 91799 | + | GT51 |
Gene ID: HRGMv2_4549_24_75
Type: TC
Location: 85720 - 86589 (+)
Type: TC
Location: 85720 - 86589 (+)
Gene ID: HRGMv2_4549_24_76
Type: TC
Location: 86576 - 86935 (+)
Type: TC
Location: 86576 - 86935 (+)
Gene ID: HRGMv2_4549_24_77
Type: TC
Location: 86965 - 87432 (+)
Type: TC
Location: 86965 - 87432 (+)
Gene ID: HRGMv2_4549_24_78
Type: TC
Location: 87512 - 88342 (+)
Type: TC
Location: 87512 - 88342 (+)
Gene ID: HRGMv2_4549_24_79
Type: pfam
Location: 88344 - 89102 (+)
Type: pfam
Location: 88344 - 89102 (+)
Gene ID: HRGMv2_4549_24_80
Type: CAZyme
Location: 89196 - 91799 (+)
Type: CAZyme
Location: 89196 - 91799 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp944384525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.