Cluster: HRGMv2_4549_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4549
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4549_24 | HRGMv2_4549_24_31 | 35855 | 38890 | - | GH38 |
| pfam | HRGMv2_4549_24 | HRGMv2_4549_24_32 | 39116 | 39958 | + | Peptidase_U4 |
| TF | HRGMv2_4549_24 | HRGMv2_4549_24_33 | 40013 | 40729 | + | HTH_3 |
| TC | HRGMv2_4549_24 | HRGMv2_4549_24_34 | 41033 | 42136 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_4549_24_31
Type: CAZyme
Location: 35855 - 38890 (-)
Type: CAZyme
Location: 35855 - 38890 (-)
Gene ID: HRGMv2_4549_24_32
Type: pfam
Location: 39116 - 39958 (+)
Type: pfam
Location: 39116 - 39958 (+)
Gene ID: HRGMv2_4549_24_33
Type: TF
Location: 40013 - 40729 (+)
Type: TF
Location: 40013 - 40729 (+)
Gene ID: HRGMv2_4549_24_34
Type: TC
Location: 41033 - 42136 (+)
Type: TC
Location: 41033 - 42136 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp944384525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.