Cluster: HRGMv2_4549_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4549
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4549_10 | HRGMv2_4549_10_11 | 11067 | 15776 | - | PL35 |
| CAZyme | HRGMv2_4549_10 | HRGMv2_4549_10_12 | 16184 | 17929 | - | GH123 |
| TC | HRGMv2_4549_10 | HRGMv2_4549_10_13 | 18144 | 20726 | - | 3.A.9.1.2 |
| TF | HRGMv2_4549_10 | HRGMv2_4549_10_14 | 21137 | 21577 | + | FUR |
| TC | HRGMv2_4549_10 | HRGMv2_4549_10_15 | 21790 | 22671 | + | 2.A.119.2.2 |
Gene ID: HRGMv2_4549_10_11
Type: CAZyme
Location: 11067 - 15776 (-)
Type: CAZyme
Location: 11067 - 15776 (-)
Gene ID: HRGMv2_4549_10_12
Type: CAZyme
Location: 16184 - 17929 (-)
Type: CAZyme
Location: 16184 - 17929 (-)
Gene ID: HRGMv2_4549_10_13
Type: TC
Location: 18144 - 20726 (-)
Type: TC
Location: 18144 - 20726 (-)
Gene ID: HRGMv2_4549_10_14
Type: TF
Location: 21137 - 21577 (+)
Type: TF
Location: 21137 - 21577 (+)
Gene ID: HRGMv2_4549_10_15
Type: TC
Location: 21790 - 22671 (+)
Type: TC
Location: 21790 - 22671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp944384525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.