Cluster: HRGMv2_4549_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4549
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4549_10 | HRGMv2_4549_10_1 | 370 | 2280 | - | 3.A.1.121.4 |
| STP | HRGMv2_4549_10 | HRGMv2_4549_10_2 | 2686 | 3603 | + | SBP_bac_3 |
| TC | HRGMv2_4549_10 | HRGMv2_4549_10_3 | 3715 | 4527 | + | 3.A.1.3.15 |
| TC | HRGMv2_4549_10 | HRGMv2_4549_10_4 | 4511 | 5344 | + | 3.A.1.3.25 |
| CAZyme | HRGMv2_4549_10 | HRGMv2_4549_10_5 | 5384 | 6802 | + | GH29 |
Gene ID: HRGMv2_4549_10_1
Type: TC
Location: 370 - 2280 (-)
Type: TC
Location: 370 - 2280 (-)
Gene ID: HRGMv2_4549_10_2
Type: STP
Location: 2686 - 3603 (+)
Type: STP
Location: 2686 - 3603 (+)
Gene ID: HRGMv2_4549_10_3
Type: TC
Location: 3715 - 4527 (+)
Type: TC
Location: 3715 - 4527 (+)
Gene ID: HRGMv2_4549_10_4
Type: TC
Location: 4511 - 5344 (+)
Type: TC
Location: 4511 - 5344 (+)
Gene ID: HRGMv2_4549_10_5
Type: CAZyme
Location: 5384 - 6802 (+)
Type: CAZyme
Location: 5384 - 6802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp944384525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.