Cluster: HRGMv2_4548_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4548
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4548_120 | HRGMv2_4548_120_3 | 2558 | 3352 | - | 3.A.1.125.3 |
| pfam | HRGMv2_4548_120 | HRGMv2_4548_120_4 | 3573 | 3821 | - | DUF6483 |
| NULL(UNKNOWN) | HRGMv2_4548_120 | HRGMv2_4548_120_5 | 3788 | 3952 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4548_120 | HRGMv2_4548_120_6 | 3967 | 5088 | - | CE9 |
| TC | HRGMv2_4548_120 | HRGMv2_4548_120_7 | 5296 | 5739 | + | 9.A.11.1.1 |
| pfam | HRGMv2_4548_120 | HRGMv2_4548_120_8 | 5753 | 6340 | + | SpoVAD |
| TC | HRGMv2_4548_120 | HRGMv2_4548_120_9 | 6354 | 6755 | + | 9.A.11.1.1 |
Gene ID: HRGMv2_4548_120_3
Type: TC
Location: 2558 - 3352 (-)
Type: TC
Location: 2558 - 3352 (-)
Gene ID: HRGMv2_4548_120_4
Type: pfam
Location: 3573 - 3821 (-)
Type: pfam
Location: 3573 - 3821 (-)
Gene ID: HRGMv2_4548_120_5
Type:
Location: 3788 - 3952 (-)
Type:
Location: 3788 - 3952 (-)
Gene ID: HRGMv2_4548_120_6
Type: CAZyme
Location: 3967 - 5088 (-)
Type: CAZyme
Location: 3967 - 5088 (-)
Gene ID: HRGMv2_4548_120_7
Type: TC
Location: 5296 - 5739 (+)
Type: TC
Location: 5296 - 5739 (+)
Gene ID: HRGMv2_4548_120_8
Type: pfam
Location: 5753 - 6340 (+)
Type: pfam
Location: 5753 - 6340 (+)
Gene ID: HRGMv2_4548_120_9
Type: TC
Location: 6354 - 6755 (+)
Type: TC
Location: 6354 - 6755 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Onthovicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.