Cluster: HRGMv2_4548_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4548
- CGC Family ID: CGCFAM_10645
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4548_279 | HRGMv2_4548_279_1 | 188 | 1165 | - | GH16 |
| NULL(UNKNOWN) | HRGMv2_4548_279 | HRGMv2_4548_279_2 | 1425 | 1670 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4548_279 | HRGMv2_4548_279_3 | 1853 | 3178 | + | 3.A.1.106.12 |
| TC | HRGMv2_4548_279 | HRGMv2_4548_279_4 | 3178 | 4860 | + | 3.A.1.106.2 |
| pfam | HRGMv2_4548_279 | HRGMv2_4548_279_5 | 4860 | 5225 | + | YgbA_NO |
| TC | HRGMv2_4548_279 | HRGMv2_4548_279_6 | 5222 | 5779 | + | 3.A.1.18.3 |
| TC | HRGMv2_4548_279 | HRGMv2_4548_279_7 | 5776 | 7890 | + | 3.A.1.18.3 |
Gene ID: HRGMv2_4548_279_1
Type: CAZyme
Location: 188 - 1165 (-)
Type: CAZyme
Location: 188 - 1165 (-)
Gene ID: HRGMv2_4548_279_2
Type:
Location: 1425 - 1670 (-)
Type:
Location: 1425 - 1670 (-)
Gene ID: HRGMv2_4548_279_3
Type: TC
Location: 1853 - 3178 (+)
Type: TC
Location: 1853 - 3178 (+)
Gene ID: HRGMv2_4548_279_4
Type: TC
Location: 3178 - 4860 (+)
Type: TC
Location: 3178 - 4860 (+)
Gene ID: HRGMv2_4548_279_5
Type: pfam
Location: 4860 - 5225 (+)
Type: pfam
Location: 4860 - 5225 (+)
Gene ID: HRGMv2_4548_279_6
Type: TC
Location: 5222 - 5779 (+)
Type: TC
Location: 5222 - 5779 (+)
Gene ID: HRGMv2_4548_279_7
Type: TC
Location: 5776 - 7890 (+)
Type: TC
Location: 5776 - 7890 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Onthovicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.