Cluster: HRGMv2_4548_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4548
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4548_179 | HRGMv2_4548_179_1 | 2 | 1018 | + | GH29 |
| pfam | HRGMv2_4548_179 | HRGMv2_4548_179_2 | 1006 | 1494 | + | Alpha_L_fucos |
| TC | HRGMv2_4548_179 | HRGMv2_4548_179_3 | 1580 | 2506 | - | 2.A.1.2.18 |
Gene ID: HRGMv2_4548_179_1
Type: CAZyme
Location: 2 - 1018 (+)
Type: CAZyme
Location: 2 - 1018 (+)
Gene ID: HRGMv2_4548_179_2
Type: pfam
Location: 1006 - 1494 (+)
Type: pfam
Location: 1006 - 1494 (+)
Gene ID: HRGMv2_4548_179_3
Type: TC
Location: 1580 - 2506 (-)
Type: TC
Location: 1580 - 2506 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Onthovicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.