Cluster: HRGMv2_4545_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4545
- CGC Family ID: CGCFAM_04286
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4545_11 | HRGMv2_4545_11_24 | 21865 | 22722 | - | 8.A.5.1.4 |
| pfam | HRGMv2_4545_11 | HRGMv2_4545_11_25 | 22745 | 23275 | - | Flavodoxin_4 |
| TF | HRGMv2_4545_11 | HRGMv2_4545_11_26 | 23396 | 24286 | + | HTH_1 |
| CAZyme | HRGMv2_4545_11 | HRGMv2_4545_11_27 | 24394 | 25821 | - | GH1 |
| TC | HRGMv2_4545_11 | HRGMv2_4545_11_28 | 25832 | 27709 | - | 4.A.1.2.11 |
Gene ID: HRGMv2_4545_11_24
Type: TC
Location: 21865 - 22722 (-)
Type: TC
Location: 21865 - 22722 (-)
Gene ID: HRGMv2_4545_11_25
Type: pfam
Location: 22745 - 23275 (-)
Type: pfam
Location: 22745 - 23275 (-)
Gene ID: HRGMv2_4545_11_26
Type: TF
Location: 23396 - 24286 (+)
Type: TF
Location: 23396 - 24286 (+)
Gene ID: HRGMv2_4545_11_27
Type: CAZyme
Location: 24394 - 25821 (-)
Type: CAZyme
Location: 24394 - 25821 (-)
Gene ID: HRGMv2_4545_11_28
Type: TC
Location: 25832 - 27709 (-)
Type: TC
Location: 25832 - 27709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp019422525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.