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Cluster: HRGMv2_4545_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4545_7 HRGMv2_4545_7_96 132893 134323 + 9.A.40.2.2
pfam HRGMv2_4545_7 HRGMv2_4545_7_97 134360 134968 + Hexapep | Mac | Hexapep_2
TC HRGMv2_4545_7 HRGMv2_4545_7_98 135024 136430 - 2.A.49.9.2
pfam HRGMv2_4545_7 HRGMv2_4545_7_99 136457 137977 - DUF4340 | DUF4340
pfam HRGMv2_4545_7 HRGMv2_4545_7_100 137981 139687 - ABC_transp_aux
TC HRGMv2_4545_7 HRGMv2_4545_7_101 139701 140405 - 3.A.1.132.4
TC HRGMv2_4545_7 HRGMv2_4545_7_102 140402 141376 - 3.A.1.132.1
STP HRGMv2_4545_7 HRGMv2_4545_7_103 141709 142284 - Pribosyltran
TC HRGMv2_4545_7 HRGMv2_4545_7_104 142415 143419 - 9.A.11.1.1
NULL(UNKNOWN) HRGMv2_4545_7 HRGMv2_4545_7_105 143642 145348 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4545_7 HRGMv2_4545_7_106 145390 145839 - 9.A.11.1.1
CAZyme HRGMv2_4545_7 HRGMv2_4545_7_107 145907 148648 - CBM67 | GH78
Gene ID: HRGMv2_4545_7_96
Type: TC
Location: 132893 - 134323 (+)
Gene ID: HRGMv2_4545_7_97
Type: pfam
Location: 134360 - 134968 (+)
Gene ID: HRGMv2_4545_7_98
Type: TC
Location: 135024 - 136430 (-)
Gene ID: HRGMv2_4545_7_99
Type: pfam
Location: 136457 - 137977 (-)
Gene ID: HRGMv2_4545_7_100
Type: pfam
Location: 137981 - 139687 (-)
Gene ID: HRGMv2_4545_7_101
Type: TC
Location: 139701 - 140405 (-)
Gene ID: HRGMv2_4545_7_102
Type: TC
Location: 140402 - 141376 (-)
Gene ID: HRGMv2_4545_7_103
Type: STP
Location: 141709 - 142284 (-)
Gene ID: HRGMv2_4545_7_104
Type: TC
Location: 142415 - 143419 (-)
Gene ID: HRGMv2_4545_7_105
Type:
Location: 143642 - 145348 (+)
Gene ID: HRGMv2_4545_7_106
Type: TC
Location: 145390 - 145839 (-)
Gene ID: HRGMv2_4545_7_107
Type: CAZyme
Location: 145907 - 148648 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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