Cluster: HRGMv2_4545_CGC25
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4545
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4545_7 | HRGMv2_4545_7_80 | 93629 | 94330 | + | 3.A.1.122.14 |
| pfam | HRGMv2_4545_7 | HRGMv2_4545_7_81 | 94330 | 97725 | + | FtsX | FtsX | MacB_PCD | MacB_PCD |
| CAZyme | HRGMv2_4545_7 | HRGMv2_4545_7_82 | 97837 | 99783 | - | GH127 |
| STP | HRGMv2_4545_7 | HRGMv2_4545_7_83 | 100654 | 102045 | + | SBP_bac_1 |
| TC | HRGMv2_4545_7 | HRGMv2_4545_7_84 | 102146 | 103108 | + | 3.A.1.1.48 |
| TC | HRGMv2_4545_7 | HRGMv2_4545_7_85 | 103133 | 104029 | + | 3.A.1.1.23 |
| CAZyme | HRGMv2_4545_7 | HRGMv2_4545_7_86 | 104291 | 111187 | + | GH121 |
| NULL(UNKNOWN) | HRGMv2_4545_7 | HRGMv2_4545_7_87 | 111241 | 111444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4545_7 | HRGMv2_4545_7_88 | 111684 | 117677 | + | GH121 |
| TF | HRGMv2_4545_7 | HRGMv2_4545_7_89 | 117834 | 118946 | + | LacI |
| CAZyme | HRGMv2_4545_7 | HRGMv2_4545_7_90 | 119471 | 125830 | + | GH121 |
Gene ID: HRGMv2_4545_7_80
Type: TC
Location: 93629 - 94330 (+)
Type: TC
Location: 93629 - 94330 (+)
Gene ID: HRGMv2_4545_7_81
Type: pfam
Location: 94330 - 97725 (+)
Type: pfam
Location: 94330 - 97725 (+)
Gene ID: HRGMv2_4545_7_82
Type: CAZyme
Location: 97837 - 99783 (-)
Type: CAZyme
Location: 97837 - 99783 (-)
Gene ID: HRGMv2_4545_7_83
Type: STP
Location: 100654 - 102045 (+)
Type: STP
Location: 100654 - 102045 (+)
Gene ID: HRGMv2_4545_7_84
Type: TC
Location: 102146 - 103108 (+)
Type: TC
Location: 102146 - 103108 (+)
Gene ID: HRGMv2_4545_7_85
Type: TC
Location: 103133 - 104029 (+)
Type: TC
Location: 103133 - 104029 (+)
Gene ID: HRGMv2_4545_7_86
Type: CAZyme
Location: 104291 - 111187 (+)
Type: CAZyme
Location: 104291 - 111187 (+)
Gene ID: HRGMv2_4545_7_87
Type:
Location: 111241 - 111444 (+)
Type:
Location: 111241 - 111444 (+)
Gene ID: HRGMv2_4545_7_88
Type: CAZyme
Location: 111684 - 117677 (+)
Type: CAZyme
Location: 111684 - 117677 (+)
Gene ID: HRGMv2_4545_7_89
Type: TF
Location: 117834 - 118946 (+)
Type: TF
Location: 117834 - 118946 (+)
Gene ID: HRGMv2_4545_7_90
Type: CAZyme
Location: 119471 - 125830 (+)
Type: CAZyme
Location: 119471 - 125830 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp019422525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.