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Cluster: HRGMv2_4545_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4545_4 HRGMv2_4545_4_140 152606 153568 - 3.A.1.147.8
TF HRGMv2_4545_4 HRGMv2_4545_4_141 153522 153911 - GntR
peptidase HRGMv2_4545_4 HRGMv2_4545_4_142 154110 155885 - M24.UPB
TC HRGMv2_4545_4 HRGMv2_4545_4_143 155964 156920 - 3.A.1.5.20
TC HRGMv2_4545_4 HRGMv2_4545_4_144 156920 157918 - 3.A.1.5.2
TC HRGMv2_4545_4 HRGMv2_4545_4_145 157926 158939 - 3.A.1.5.2
TC HRGMv2_4545_4 HRGMv2_4545_4_146 158945 159901 - 3.A.1.5.2
TC HRGMv2_4545_4 HRGMv2_4545_4_147 160157 161866 - 3.A.1.5.2
TC HRGMv2_4545_4 HRGMv2_4545_4_148 162686 164440 - 2.A.114.1.3
CAZyme HRGMv2_4545_4 HRGMv2_4545_4_149 164729 166006 - GH125
TC HRGMv2_4545_4 HRGMv2_4545_4_150 166067 166594 - 1.I.1.1.3
Gene ID: HRGMv2_4545_4_140
Type: TC
Location: 152606 - 153568 (-)
Gene ID: HRGMv2_4545_4_141
Type: TF
Location: 153522 - 153911 (-)
Gene ID: HRGMv2_4545_4_142
Type: peptidase
Location: 154110 - 155885 (-)
Gene ID: HRGMv2_4545_4_143
Type: TC
Location: 155964 - 156920 (-)
Gene ID: HRGMv2_4545_4_144
Type: TC
Location: 156920 - 157918 (-)
Gene ID: HRGMv2_4545_4_145
Type: TC
Location: 157926 - 158939 (-)
Gene ID: HRGMv2_4545_4_146
Type: TC
Location: 158945 - 159901 (-)
Gene ID: HRGMv2_4545_4_147
Type: TC
Location: 160157 - 161866 (-)
Gene ID: HRGMv2_4545_4_148
Type: TC
Location: 162686 - 164440 (-)
Gene ID: HRGMv2_4545_4_149
Type: CAZyme
Location: 164729 - 166006 (-)
Gene ID: HRGMv2_4545_4_150
Type: TC
Location: 166067 - 166594 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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