Cluster: HRGMv2_4545_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4545
- CGC Family ID: CGCFAM_04087
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4545_3 | HRGMv2_4545_3_168 | 161766 | 162470 | - | 9.B.149.1.11 |
| pfam | HRGMv2_4545_3 | HRGMv2_4545_3_169 | 162673 | 166227 | - | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| pfam | HRGMv2_4545_3 | HRGMv2_4545_3_170 | 166330 | 167457 | - | RF-1 | PCRF |
| CAZyme | HRGMv2_4545_3 | HRGMv2_4545_3_171 | 167717 | 168538 | + | CE4 |
Gene ID: HRGMv2_4545_3_168
Type: TC
Location: 161766 - 162470 (-)
Type: TC
Location: 161766 - 162470 (-)
Gene ID: HRGMv2_4545_3_169
Type: pfam
Location: 162673 - 166227 (-)
Type: pfam
Location: 162673 - 166227 (-)
Gene ID: HRGMv2_4545_3_170
Type: pfam
Location: 166330 - 167457 (-)
Type: pfam
Location: 166330 - 167457 (-)
Gene ID: HRGMv2_4545_3_171
Type: CAZyme
Location: 167717 - 168538 (+)
Type: CAZyme
Location: 167717 - 168538 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp019422525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.