Cluster: HRGMv2_4543_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4543
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4543_29 | HRGMv2_4543_29_5 | 3123 | 5579 | + | 3.A.9.1.2 |
| pfam | HRGMv2_4543_29 | HRGMv2_4543_29_6 | 5840 | 6412 | - | UDG |
| pfam | HRGMv2_4543_29 | HRGMv2_4543_29_7 | 6521 | 7090 | + | PTAC |
| CAZyme | HRGMv2_4543_29 | HRGMv2_4543_29_8 | 7156 | 7941 | - | CE1 |
| NULL(UNKNOWN) | HRGMv2_4543_29 | HRGMv2_4543_29_9 | 8037 | 8465 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4543_29 | HRGMv2_4543_29_10 | 8477 | 9034 | - | MecA | MecA |
| CAZyme | HRGMv2_4543_29 | HRGMv2_4543_29_11 | 9203 | 10735 | + | GH13_44 |
Gene ID: HRGMv2_4543_29_5
Type: TC
Location: 3123 - 5579 (+)
Type: TC
Location: 3123 - 5579 (+)
Gene ID: HRGMv2_4543_29_6
Type: pfam
Location: 5840 - 6412 (-)
Type: pfam
Location: 5840 - 6412 (-)
Gene ID: HRGMv2_4543_29_7
Type: pfam
Location: 6521 - 7090 (+)
Type: pfam
Location: 6521 - 7090 (+)
Gene ID: HRGMv2_4543_29_8
Type: CAZyme
Location: 7156 - 7941 (-)
Type: CAZyme
Location: 7156 - 7941 (-)
Gene ID: HRGMv2_4543_29_9
Type:
Location: 8037 - 8465 (+)
Type:
Location: 8037 - 8465 (+)
Gene ID: HRGMv2_4543_29_10
Type: pfam
Location: 8477 - 9034 (-)
Type: pfam
Location: 8477 - 9034 (-)
Gene ID: HRGMv2_4543_29_11
Type: CAZyme
Location: 9203 - 10735 (+)
Type: CAZyme
Location: 9203 - 10735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.