Cluster: HRGMv2_4543_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4543
- CGC Family ID: CGCFAM_06200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4543_18 | HRGMv2_4543_18_34 | 46771 | 47472 | - | 3.A.1.122.7 |
| TC | HRGMv2_4543_18 | HRGMv2_4543_18_35 | 47781 | 49124 | + | 2.A.66.1.3 |
| STP | HRGMv2_4543_18 | HRGMv2_4543_18_36 | 49334 | 50539 | - | ACT | ACT |
| pfam | HRGMv2_4543_18 | HRGMv2_4543_18_37 | 50561 | 51796 | - | Homoserine_dh | NAD_binding_3 |
| CAZyme | HRGMv2_4543_18 | HRGMv2_4543_18_38 | 51839 | 54241 | - | GT51 |
Gene ID: HRGMv2_4543_18_34
Type: TC
Location: 46771 - 47472 (-)
Type: TC
Location: 46771 - 47472 (-)
Gene ID: HRGMv2_4543_18_35
Type: TC
Location: 47781 - 49124 (+)
Type: TC
Location: 47781 - 49124 (+)
Gene ID: HRGMv2_4543_18_36
Type: STP
Location: 49334 - 50539 (-)
Type: STP
Location: 49334 - 50539 (-)
Gene ID: HRGMv2_4543_18_37
Type: pfam
Location: 50561 - 51796 (-)
Type: pfam
Location: 50561 - 51796 (-)
Gene ID: HRGMv2_4543_18_38
Type: CAZyme
Location: 51839 - 54241 (-)
Type: CAZyme
Location: 51839 - 54241 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.