Cluster: HRGMv2_4543_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4543
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4543_6 | HRGMv2_4543_6_72 | 80208 | 83078 | - | 3.A.5.1.3 |
| pfam | HRGMv2_4543_6 | HRGMv2_4543_6_73 | 83133 | 84599 | - | Transpeptidase |
| TC | HRGMv2_4543_6 | HRGMv2_4543_6_74 | 84740 | 86416 | - | 2.A.103.1.7 |
| NULL(UNKNOWN) | HRGMv2_4543_6 | HRGMv2_4543_6_75 | 86964 | 88673 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4543_6 | HRGMv2_4543_6_76 | 88689 | 90200 | + | GT100 |
Gene ID: HRGMv2_4543_6_72
Type: TC
Location: 80208 - 83078 (-)
Type: TC
Location: 80208 - 83078 (-)
Gene ID: HRGMv2_4543_6_73
Type: pfam
Location: 83133 - 84599 (-)
Type: pfam
Location: 83133 - 84599 (-)
Gene ID: HRGMv2_4543_6_74
Type: TC
Location: 84740 - 86416 (-)
Type: TC
Location: 84740 - 86416 (-)
Gene ID: HRGMv2_4543_6_75
Type:
Location: 86964 - 88673 (+)
Type:
Location: 86964 - 88673 (+)
Gene ID: HRGMv2_4543_6_76
Type: CAZyme
Location: 88689 - 90200 (+)
Type: CAZyme
Location: 88689 - 90200 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.