Cluster: HRGMv2_4543_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4543
- CGC Family ID: CGCFAM_06194
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4543_5 | HRGMv2_4543_5_4 | 7460 | 8149 | + | 9.B.143.2.2 |
| pfam | HRGMv2_4543_5 | HRGMv2_4543_5_5 | 8377 | 9027 | - | Hydrolase | HAD | HAD_2 |
| CAZyme | HRGMv2_4543_5 | HRGMv2_4543_5_6 | 9029 | 10627 | - | GT100 |
Gene ID: HRGMv2_4543_5_4
Type: TC
Location: 7460 - 8149 (+)
Type: TC
Location: 7460 - 8149 (+)
Gene ID: HRGMv2_4543_5_5
Type: pfam
Location: 8377 - 9027 (-)
Type: pfam
Location: 8377 - 9027 (-)
Gene ID: HRGMv2_4543_5_6
Type: CAZyme
Location: 9029 - 10627 (-)
Type: CAZyme
Location: 9029 - 10627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.