Cluster: HRGMv2_4543_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4543
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4543_41 | HRGMv2_4543_41_58 | 61525 | 63543 | - | CBM48 | GH13_9 |
| pfam | HRGMv2_4543_41 | HRGMv2_4543_41_59 | 63747 | 64883 | - | CTP_transf_like | HIGH_NTase1 |
| pfam | HRGMv2_4543_41 | HRGMv2_4543_41_60 | 65033 | 66241 | + | Acetate_kinase |
| TC | HRGMv2_4543_41 | HRGMv2_4543_41_61 | 66600 | 67904 | - | 9.A.40.2.1 |
Gene ID: HRGMv2_4543_41_58
Type: CAZyme
Location: 61525 - 63543 (-)
Type: CAZyme
Location: 61525 - 63543 (-)
Gene ID: HRGMv2_4543_41_59
Type: pfam
Location: 63747 - 64883 (-)
Type: pfam
Location: 63747 - 64883 (-)
Gene ID: HRGMv2_4543_41_60
Type: pfam
Location: 65033 - 66241 (+)
Type: pfam
Location: 65033 - 66241 (+)
Gene ID: HRGMv2_4543_41_61
Type: TC
Location: 66600 - 67904 (-)
Type: TC
Location: 66600 - 67904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.