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Cluster: HRGMv2_4543_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4543_31 HRGMv2_4543_31_42 38749 42786 - 2.A.6.3.6
STP HRGMv2_4543_31 HRGMv2_4543_31_43 42863 43474 - TetR_N
pfam HRGMv2_4543_31 HRGMv2_4543_31_44 43658 45265 - Wzy_C
TC HRGMv2_4543_31 HRGMv2_4543_31_45 45449 46258 - 3.A.1.3.14
TC HRGMv2_4543_31 HRGMv2_4543_31_46 46271 46921 - 3.A.1.3.14
STP HRGMv2_4543_31 HRGMv2_4543_31_47 46949 47755 - SBP_bac_3
pfam HRGMv2_4543_31 HRGMv2_4543_31_48 47941 49137 + Alk_phosphatase | Metalloenzyme
CAZyme HRGMv2_4543_31 HRGMv2_4543_31_49 49319 50770 - CBM13
Gene ID: HRGMv2_4543_31_42
Type: TC
Location: 38749 - 42786 (-)
Gene ID: HRGMv2_4543_31_43
Type: STP
Location: 42863 - 43474 (-)
Gene ID: HRGMv2_4543_31_44
Type: pfam
Location: 43658 - 45265 (-)
Gene ID: HRGMv2_4543_31_45
Type: TC
Location: 45449 - 46258 (-)
Gene ID: HRGMv2_4543_31_46
Type: TC
Location: 46271 - 46921 (-)
Gene ID: HRGMv2_4543_31_47
Type: STP
Location: 46949 - 47755 (-)
Gene ID: HRGMv2_4543_31_48
Type: pfam
Location: 47941 - 49137 (+)
Gene ID: HRGMv2_4543_31_49
Type: CAZyme
Location: 49319 - 50770 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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