Cluster: HRGMv2_4542_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4542
- CGC Family ID: CGCFAM_00909
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4542_128 | HRGMv2_4542_128_2 | 661 | 1287 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_4542_128 | HRGMv2_4542_128_3 | 1350 | 4409 | + | GH2 |
| pfam | HRGMv2_4542_128 | HRGMv2_4542_128_4 | 4630 | 6060 | + | Radical_SAM |
| TC | HRGMv2_4542_128 | HRGMv2_4542_128_5 | 6169 | 7434 | + | 9.A.40.2.2 |
Gene ID: HRGMv2_4542_128_2
Type: TC
Location: 661 - 1287 (+)
Type: TC
Location: 661 - 1287 (+)
Gene ID: HRGMv2_4542_128_3
Type: CAZyme
Location: 1350 - 4409 (+)
Type: CAZyme
Location: 1350 - 4409 (+)
Gene ID: HRGMv2_4542_128_4
Type: pfam
Location: 4630 - 6060 (+)
Type: pfam
Location: 4630 - 6060 (+)
Gene ID: HRGMv2_4542_128_5
Type: TC
Location: 6169 - 7434 (+)
Type: TC
Location: 6169 - 7434 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.