Cluster: HRGMv2_4542_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4542
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4542_424 | HRGMv2_4542_424_1 | 137 | 580 | - | 9.A.11.1.1 |
| TC | HRGMv2_4542_424 | HRGMv2_4542_424_2 | 720 | 1466 | + | 3.A.1.122.14 |
| TC | HRGMv2_4542_424 | HRGMv2_4542_424_3 | 1515 | 1868 | + | 9.A.11.1.1 |
| pfam | HRGMv2_4542_424 | HRGMv2_4542_424_4 | 1956 | 2285 | + | SCP2 |
| CAZyme | HRGMv2_4542_424 | HRGMv2_4542_424_5 | 2476 | 4935 | + | GH3 |
Gene ID: HRGMv2_4542_424_1
Type: TC
Location: 137 - 580 (-)
Type: TC
Location: 137 - 580 (-)
Gene ID: HRGMv2_4542_424_2
Type: TC
Location: 720 - 1466 (+)
Type: TC
Location: 720 - 1466 (+)
Gene ID: HRGMv2_4542_424_3
Type: TC
Location: 1515 - 1868 (+)
Type: TC
Location: 1515 - 1868 (+)
Gene ID: HRGMv2_4542_424_4
Type: pfam
Location: 1956 - 2285 (+)
Type: pfam
Location: 1956 - 2285 (+)
Gene ID: HRGMv2_4542_424_5
Type: CAZyme
Location: 2476 - 4935 (+)
Type: CAZyme
Location: 2476 - 4935 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.