Cluster: HRGMv2_4542_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: HRGMv2_4542
- CGC Family ID: CGCFAM_02286
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4542_375 | HRGMv2_4542_375_1 | 1 | 1404 | + | GH4 |
| STP | HRGMv2_4542_375 | HRGMv2_4542_375_2 | 1404 | 2282 | + | PfkB |
| peptidase | HRGMv2_4542_375 | HRGMv2_4542_375_3 | 2336 | 3289 | + | S09.UPW |
| TC | HRGMv2_4542_375 | HRGMv2_4542_375_4 | 3382 | 4851 | + | 2.A.2.1.1 |
Gene ID: HRGMv2_4542_375_1
Type: CAZyme
Location: 1 - 1404 (+)
Type: CAZyme
Location: 1 - 1404 (+)
Gene ID: HRGMv2_4542_375_2
Type: STP
Location: 1404 - 2282 (+)
Type: STP
Location: 1404 - 2282 (+)
Gene ID: HRGMv2_4542_375_3
Type: peptidase
Location: 2336 - 3289 (+)
Type: peptidase
Location: 2336 - 3289 (+)
Gene ID: HRGMv2_4542_375_4
Type: TC
Location: 3382 - 4851 (+)
Type: TC
Location: 3382 - 4851 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.