Cluster: HRGMv2_4541_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_14 | HRGMv2_4541_14_2 | 1042 | 1590 | - | 3.A.1.25.3 |
| pfam | HRGMv2_4541_14 | HRGMv2_4541_14_3 | 1709 | 2527 | - | SpoU_methylase |
| CAZyme | HRGMv2_4541_14 | HRGMv2_4541_14_4 | 2538 | 5393 | - | CBM13 | CBM13 | PL1 |
| NULL(UNKNOWN) | HRGMv2_4541_14 | HRGMv2_4541_14_5 | 5640 | 5873 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4541_14 | HRGMv2_4541_14_6 | 6028 | 6333 | + | Trns_repr_metal |
| TC | HRGMv2_4541_14 | HRGMv2_4541_14_7 | 6344 | 8857 | + | 3.A.3.5.15 |
Gene ID: HRGMv2_4541_14_2
Type: TC
Location: 1042 - 1590 (-)
Type: TC
Location: 1042 - 1590 (-)
Gene ID: HRGMv2_4541_14_3
Type: pfam
Location: 1709 - 2527 (-)
Type: pfam
Location: 1709 - 2527 (-)
Gene ID: HRGMv2_4541_14_4
Type: CAZyme
Location: 2538 - 5393 (-)
Type: CAZyme
Location: 2538 - 5393 (-)
Gene ID: HRGMv2_4541_14_5
Type:
Location: 5640 - 5873 (+)
Type:
Location: 5640 - 5873 (+)
Gene ID: HRGMv2_4541_14_6
Type: pfam
Location: 6028 - 6333 (+)
Type: pfam
Location: 6028 - 6333 (+)
Gene ID: HRGMv2_4541_14_7
Type: TC
Location: 6344 - 8857 (+)
Type: TC
Location: 6344 - 8857 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.