Cluster: HRGMv2_4541_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- CGC Family ID: CGCFAM_01591
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_10 | HRGMv2_4541_10_1 | 3 | 320 | + | 3.A.1.1.7 |
| TC | HRGMv2_4541_10 | HRGMv2_4541_10_2 | 317 | 1144 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_4541_10 | HRGMv2_4541_10_3 | 1141 | 2274 | + | GH105 |
| TC | HRGMv2_4541_10 | HRGMv2_4541_10_4 | 2359 | 3336 | - | 8.A.21.2.2 |
Gene ID: HRGMv2_4541_10_1
Type: TC
Location: 3 - 320 (+)
Type: TC
Location: 3 - 320 (+)
Gene ID: HRGMv2_4541_10_2
Type: TC
Location: 317 - 1144 (+)
Type: TC
Location: 317 - 1144 (+)
Gene ID: HRGMv2_4541_10_3
Type: CAZyme
Location: 1141 - 2274 (+)
Type: CAZyme
Location: 1141 - 2274 (+)
Gene ID: HRGMv2_4541_10_4
Type: TC
Location: 2359 - 3336 (-)
Type: TC
Location: 2359 - 3336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.